Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Zfp42P22227 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Zfp42P22227 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Zfp42P22227 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.3■□□□□ 0.52
Zfp42P22227 Gm8495-201ENSMUST00000188740 694 ntBASIC18.3■□□□□ 0.52
Zfp42P22227 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.3■□□□□ 0.52
Zfp42P22227 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zfp42P22227 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
Zfp42P22227 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Zfp42P22227 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Zfp42P22227 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.29■□□□□ 0.52
Zfp42P22227 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.29■□□□□ 0.52
Zfp42P22227 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.29■□□□□ 0.52
Zfp42P22227 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.29■□□□□ 0.52
Zfp42P22227 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp42P22227 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.29■□□□□ 0.52
Zfp42P22227 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Zfp42P22227 Gm38285-201ENSMUST00000192928 922 ntBASIC18.28■□□□□ 0.52
Zfp42P22227 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Zfp42P22227 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp42P22227 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Zfp42P22227 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.27■□□□□ 0.52
Zfp42P22227 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.27■□□□□ 0.52
Zfp42P22227 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.27■□□□□ 0.52
Zfp42P22227 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.27■□□□□ 0.52
Zfp42P22227 Mir5133-201ENSMUST00000174955 77 ntBASIC18.27■□□□□ 0.52
Zfp42P22227 Gm44549-201ENSMUST00000208351 577 ntBASIC18.27■□□□□ 0.52
Zfp42P22227 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.27■□□□□ 0.52
Zfp42P22227 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Zfp42P22227 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.27■□□□□ 0.52
Zfp42P22227 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Zfp42P22227 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp42P22227 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Zfp42P22227 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zfp42P22227 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zfp42P22227 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.26■□□□□ 0.51
Zfp42P22227 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Zfp42P22227 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.26■□□□□ 0.51
Zfp42P22227 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Zfp42P22227 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Flg-201ENSMUST00000050758 1488 ntBASIC18.26■□□□□ 0.51
Zfp42P22227 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp42P22227 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms