Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.69■□□□□ 0.26
BdnfP21237 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BdnfP21237 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BdnfP21237 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
BdnfP21237 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.68■□□□□ 0.26
BdnfP21237 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.68■□□□□ 0.26
BdnfP21237 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.68■□□□□ 0.26
BdnfP21237 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BdnfP21237 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.68■□□□□ 0.26
BdnfP21237 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BdnfP21237 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.68■□□□□ 0.26
BdnfP21237 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.67■□□□□ 0.26
BdnfP21237 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.67■□□□□ 0.26
BdnfP21237 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.67■□□□□ 0.26
BdnfP21237 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BdnfP21237 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Gm27405-201ENSMUST00000184201 112 ntBASIC16.67■□□□□ 0.26
BdnfP21237 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.67■□□□□ 0.26
BdnfP21237 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BdnfP21237 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.67■□□□□ 0.26
BdnfP21237 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BdnfP21237 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.66■□□□□ 0.26
BdnfP21237 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Gm13148-201ENSMUST00000118892 745 ntBASIC16.66■□□□□ 0.26
BdnfP21237 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.66■□□□□ 0.26
BdnfP21237 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BdnfP21237 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BdnfP21237 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BdnfP21237 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BdnfP21237 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BdnfP21237 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
BdnfP21237 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BdnfP21237 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
BdnfP21237 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.65■□□□□ 0.26
BdnfP21237 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.65■□□□□ 0.26
BdnfP21237 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BdnfP21237 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.65■□□□□ 0.26
BdnfP21237 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.65■□□□□ 0.26
BdnfP21237 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.65■□□□□ 0.26
BdnfP21237 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BdnfP21237 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.64■□□□□ 0.25
BdnfP21237 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
BdnfP21237 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
BdnfP21237 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BdnfP21237 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms