Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.83■□□□□ 0.44
Hmga1P17095 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.83■□□□□ 0.44
Hmga1P17095 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Hmga1P17095 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.82■□□□□ 0.44
Hmga1P17095 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.82■□□□□ 0.44
Hmga1P17095 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Hmga1P17095 AA414768-201ENSMUST00000121924 1257 ntBASIC17.82■□□□□ 0.44
Hmga1P17095 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Gm6345-202ENSMUST00000180900 204 ntBASIC17.82■□□□□ 0.44
Hmga1P17095 Mir1668-201ENSMUST00000184114 107 ntBASIC17.82■□□□□ 0.44
Hmga1P17095 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.82■□□□□ 0.44
Hmga1P17095 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Hmga1P17095 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hmga1P17095 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmga1P17095 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Hmga1P17095 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Gm7213-201ENSMUST00000215977 950 ntBASIC17.81■□□□□ 0.44
Hmga1P17095 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.81■□□□□ 0.44
Hmga1P17095 Gm21559-201ENSMUST00000220638 855 ntBASIC17.81■□□□□ 0.44
Hmga1P17095 Gm8587-201ENSMUST00000076538 843 ntBASIC17.81■□□□□ 0.44
Hmga1P17095 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.81■□□□□ 0.44
Hmga1P17095 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.81■□□□□ 0.44
Hmga1P17095 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmga1P17095 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Hmga1P17095 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.8■□□□□ 0.44
Hmga1P17095 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.8■□□□□ 0.44
Hmga1P17095 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hmga1P17095 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.8■□□□□ 0.44
Hmga1P17095 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hmga1P17095 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hmga1P17095 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmga1P17095 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmga1P17095 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hmga1P17095 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Hmga1P17095 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.79■□□□□ 0.44
Hmga1P17095 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.79■□□□□ 0.44
Hmga1P17095 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hmga1P17095 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Hmga1P17095 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmga1P17095 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmga1P17095 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hmga1P17095 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hmga1P17095 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmga1P17095 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hmga1P17095 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hmga1P17095 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmga1P17095 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.77■□□□□ 0.44
Hmga1P17095 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmga1P17095 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms