Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh3P13705 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh3P13705 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Msh3P13705 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Msh3P13705 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh3P13705 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Msh3P13705 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Msh3P13705 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.14■□□□□ 0.66
Msh3P13705 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh3P13705 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Msh3P13705 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.14■□□□□ 0.66
Msh3P13705 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.14■□□□□ 0.65
Msh3P13705 Gm22240-201ENSMUST00000175225 82 ntBASIC19.14■□□□□ 0.65
Msh3P13705 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.14■□□□□ 0.65
Msh3P13705 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Msh3P13705 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh3P13705 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh3P13705 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.13■□□□□ 0.65
Msh3P13705 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh3P13705 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Msh3P13705 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Gm715-201ENSMUST00000117865 831 ntBASIC19.12■□□□□ 0.65
Msh3P13705 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.12■□□□□ 0.65
Msh3P13705 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Msh3P13705 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.12■□□□□ 0.65
Msh3P13705 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Msh3P13705 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.12■□□□□ 0.65
Msh3P13705 Gm37025-201ENSMUST00000195159 829 ntBASIC19.12■□□□□ 0.65
Msh3P13705 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Msh3P13705 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.12■□□□□ 0.65
Msh3P13705 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh3P13705 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Msh3P13705 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Gm38027-201ENSMUST00000192315 235 ntBASIC19.11■□□□□ 0.65
Msh3P13705 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Msh3P13705 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.11■□□□□ 0.65
Msh3P13705 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh3P13705 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Msh3P13705 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Msh3P13705 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Msh3P13705 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.1■□□□□ 0.65
Msh3P13705 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.1■□□□□ 0.65
Msh3P13705 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.1■□□□□ 0.65
Msh3P13705 Gm21814-202ENSMUST00000203277 873 ntBASIC19.1■□□□□ 0.65
Msh3P13705 Odf3b-204ENSMUST00000227834 930 ntBASIC19.1■□□□□ 0.65
Msh3P13705 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.1■□□□□ 0.65
Msh3P13705 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh3P13705 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Msh3P13705 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Msh3P13705 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh3P13705 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.09■□□□□ 0.65
Msh3P13705 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms