Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl1P12850 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl1P12850 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl1P12850 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Cxcl1P12850 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl1P12850 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl1P12850 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl1P12850 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl1P12850 Gm2399-201ENSMUST00000104944 225 ntBASIC14.43□□□□□ -0.1
Cxcl1P12850 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.43□□□□□ -0.1
Cxcl1P12850 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.43□□□□□ -0.1
Cxcl1P12850 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cxcl1P12850 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.43□□□□□ -0.1
Cxcl1P12850 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cxcl1P12850 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl1P12850 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl1P12850 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cxcl1P12850 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cxcl1P12850 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.42□□□□□ -0.1
Cxcl1P12850 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Zfp783-201ENSMUST00000095946 670 ntBASIC14.42□□□□□ -0.1
Cxcl1P12850 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cxcl1P12850 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.42□□□□□ -0.1
Cxcl1P12850 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl1P12850 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.41□□□□□ -0.1
Cxcl1P12850 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Gm18671-201ENSMUST00000214826 683 ntBASIC14.41□□□□□ -0.1
Cxcl1P12850 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl1P12850 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl1P12850 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.41□□□□□ -0.1
Cxcl1P12850 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl1P12850 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl1P12850 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl1P12850 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms