Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.12■□□□□ 0.17
Cdh3P10287 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh3P10287 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh3P10287 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh3P10287 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh3P10287 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh3P10287 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh3P10287 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cdh3P10287 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh3P10287 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.11■□□□□ 0.17
Cdh3P10287 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Haglr-201ENSMUST00000100000 2085 ntBASIC16.11■□□□□ 0.17
Cdh3P10287 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cdh3P10287 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdh3P10287 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdh3P10287 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh3P10287 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Cdh3P10287 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh3P10287 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.1■□□□□ 0.17
Cdh3P10287 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdh3P10287 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdh3P10287 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.1■□□□□ 0.17
Cdh3P10287 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh3P10287 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cdh3P10287 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.09■□□□□ 0.17
Cdh3P10287 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cdh3P10287 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cdh3P10287 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh3P10287 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh3P10287 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Cdh3P10287 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh3P10287 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cdh3P10287 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cdh3P10287 Gm26524-201ENSMUST00000192339 390 ntBASIC16.08■□□□□ 0.16
Cdh3P10287 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdh3P10287 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cdh3P10287 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cdh3P10287 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.08■□□□□ 0.16
Cdh3P10287 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh3P10287 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdh3P10287 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh3P10287 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cdh3P10287 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdh3P10287 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.07■□□□□ 0.16
Cdh3P10287 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh3P10287 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms