Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Surf1P09925 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Surf1P09925 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Surf1P09925 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.66■□□□□ 0.74
Surf1P09925 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Surf1P09925 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Surf1P09925 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Surf1P09925 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Surf1P09925 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.66■□□□□ 0.74
Surf1P09925 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.66■□□□□ 0.74
Surf1P09925 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Surf1P09925 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.66■□□□□ 0.74
Surf1P09925 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Surf1P09925 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Surf1P09925 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.65■□□□□ 0.74
Surf1P09925 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.65■□□□□ 0.74
Surf1P09925 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.65■□□□□ 0.74
Surf1P09925 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.65■□□□□ 0.74
Surf1P09925 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
Surf1P09925 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Surf1P09925 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.64■□□□□ 0.73
Surf1P09925 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.64■□□□□ 0.73
Surf1P09925 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.64■□□□□ 0.73
Surf1P09925 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.64■□□□□ 0.73
Surf1P09925 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Surf1P09925 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Surf1P09925 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Surf1P09925 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.63■□□□□ 0.73
Surf1P09925 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Surf1P09925 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Surf1P09925 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Surf1P09925 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Surf1P09925 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Surf1P09925 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.62■□□□□ 0.73
Surf1P09925 Gm18025-201ENSMUST00000221733 862 ntBASIC19.62■□□□□ 0.73
Surf1P09925 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.62■□□□□ 0.73
Surf1P09925 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Surf1P09925 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Surf1P09925 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.61■□□□□ 0.73
Surf1P09925 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Surf1P09925 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Surf1P09925 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Surf1P09925 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Surf1P09925 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Surf1P09925 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.6■□□□□ 0.73
Surf1P09925 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
Surf1P09925 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.6■□□□□ 0.73
Surf1P09925 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.6■□□□□ 0.73
Surf1P09925 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Surf1P09925 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Surf1P09925 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
Surf1P09925 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Surf1P09925 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Surf1P09925 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Surf1P09925 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Surf1P09925 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.59■□□□□ 0.73
Surf1P09925 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Surf1P09925 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
Surf1P09925 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.59■□□□□ 0.73
Surf1P09925 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms