Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ercc1P07903 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ercc1P07903 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ercc1P07903 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc1P07903 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ercc1P07903 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
Ercc1P07903 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.61□□□□□ -0.07
Ercc1P07903 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ercc1P07903 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ercc1P07903 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.61□□□□□ -0.07
Ercc1P07903 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.61□□□□□ -0.07
Ercc1P07903 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc1P07903 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ercc1P07903 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ercc1P07903 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ercc1P07903 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ercc1P07903 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ercc1P07903 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.6□□□□□ -0.07
Ercc1P07903 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ercc1P07903 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ercc1P07903 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Ercc1P07903 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.6□□□□□ -0.07
Ercc1P07903 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ercc1P07903 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.59□□□□□ -0.07
Ercc1P07903 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ercc1P07903 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ercc1P07903 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ercc1P07903 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ercc1P07903 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ercc1P07903 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ercc1P07903 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ercc1P07903 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ercc1P07903 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.58□□□□□ -0.08
Ercc1P07903 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ercc1P07903 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ercc1P07903 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.58□□□□□ -0.08
Ercc1P07903 Gm9988-201ENSMUST00000069786 435 ntBASIC14.58□□□□□ -0.08
Ercc1P07903 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ercc1P07903 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms