Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.77□□□□□ -0.37
P06328 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P06328 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.77□□□□□ -0.37
P06328 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P06328 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
P06328 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P06328 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P06328 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P06328 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P06328 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P06328 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.76□□□□□ -0.37
P06328 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.76□□□□□ -0.37
P06328 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.76□□□□□ -0.37
P06328 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.76□□□□□ -0.37
P06328 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P06328 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P06328 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
P06328 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
P06328 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
P06328 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.75□□□□□ -0.37
P06328 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
P06328 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.75□□□□□ -0.37
P06328 Gm13148-201ENSMUST00000118892 745 ntBASIC12.75□□□□□ -0.37
P06328 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.75□□□□□ -0.37
P06328 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
P06328 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.75□□□□□ -0.37
P06328 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.75□□□□□ -0.37
P06328 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
P06328 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
P06328 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.75□□□□□ -0.37
P06328 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.75□□□□□ -0.37
P06328 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.75□□□□□ -0.37
P06328 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
P06328 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
P06328 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P06328 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06328 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06328 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06328 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P06328 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
P06328 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.74□□□□□ -0.37
P06328 Mir2861-201ENSMUST00000175539 82 ntBASIC12.74□□□□□ -0.37
P06328 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.74□□□□□ -0.37
P06328 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Rab3c-203ENSMUST00000224180 967 ntBASIC12.74□□□□□ -0.37
P06328 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06328 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06328 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms