Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.05□□□□□ -0.64
P06320 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.05□□□□□ -0.64
P06320 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.05□□□□□ -0.64
P06320 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06320 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.04□□□□□ -0.64
P06320 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.04□□□□□ -0.64
P06320 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.04□□□□□ -0.64
P06320 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P06320 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
P06320 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P06320 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
P06320 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
P06320 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P06320 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P06320 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P06320 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06320 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.03□□□□□ -0.64
P06320 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P06320 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.03□□□□□ -0.64
P06320 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.03□□□□□ -0.64
P06320 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.03□□□□□ -0.64
P06320 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.03□□□□□ -0.64
P06320 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.03□□□□□ -0.64
P06320 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.03□□□□□ -0.64
P06320 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P06320 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.03□□□□□ -0.64
P06320 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.03□□□□□ -0.64
P06320 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
P06320 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
P06320 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06320 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.02□□□□□ -0.64
P06320 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06320 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06320 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
P06320 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
P06320 Gm12922-201ENSMUST00000120626 809 ntBASIC11.02□□□□□ -0.65
P06320 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.02□□□□□ -0.65
P06320 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms