Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PdgfrbP05622 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.6■□□□□ 0.41
PdgfrbP05622 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PdgfrbP05622 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.59■□□□□ 0.41
PdgfrbP05622 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.59■□□□□ 0.41
PdgfrbP05622 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PdgfrbP05622 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PdgfrbP05622 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PdgfrbP05622 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.58■□□□□ 0.41
PdgfrbP05622 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PdgfrbP05622 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PdgfrbP05622 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.58■□□□□ 0.4
PdgfrbP05622 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PdgfrbP05622 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PdgfrbP05622 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PdgfrbP05622 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.57■□□□□ 0.4
PdgfrbP05622 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.57■□□□□ 0.4
PdgfrbP05622 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PdgfrbP05622 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfrbP05622 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PdgfrbP05622 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PdgfrbP05622 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PdgfrbP05622 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfrbP05622 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Gm8520-201ENSMUST00000186517 868 ntBASIC17.55■□□□□ 0.4
PdgfrbP05622 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
PdgfrbP05622 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PdgfrbP05622 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PdgfrbP05622 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PdgfrbP05622 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PdgfrbP05622 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PdgfrbP05622 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfrbP05622 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms