Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P03980 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P03980 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P03980 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P03980 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P03980 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.48□□□□□ -0.25
P03980 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.48□□□□□ -0.25
P03980 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P03980 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P03980 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
P03980 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P03980 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
P03980 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
P03980 Mir8112-201ENSMUST00000184382 131 ntBASIC13.47□□□□□ -0.25
P03980 Gm42778-201ENSMUST00000199644 553 ntBASIC13.47□□□□□ -0.25
P03980 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.47□□□□□ -0.25
P03980 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.47□□□□□ -0.25
P03980 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.47□□□□□ -0.25
P03980 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P03980 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P03980 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
P03980 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.46□□□□□ -0.25
P03980 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P03980 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P03980 Gm29791-202ENSMUST00000207888 369 ntBASIC13.46□□□□□ -0.25
P03980 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
P03980 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P03980 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P03980 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P03980 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
P03980 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P03980 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.46□□□□□ -0.26
P03980 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P03980 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.45□□□□□ -0.26
P03980 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.45□□□□□ -0.26
P03980 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.45□□□□□ -0.26
P03980 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
P03980 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
P03980 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.45□□□□□ -0.26
P03980 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.45□□□□□ -0.26
P03980 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P03980 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
P03980 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
P03980 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P03980 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms