Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxa3P02831 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxa3P02831 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Hoxa3P02831 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.6□□□□□ -0.07
Hoxa3P02831 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.6□□□□□ -0.07
Hoxa3P02831 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.6□□□□□ -0.07
Hoxa3P02831 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Gm9987-201ENSMUST00000069768 567 ntBASIC14.6□□□□□ -0.07
Hoxa3P02831 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxa3P02831 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.6□□□□□ -0.07
Hoxa3P02831 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.59□□□□□ -0.07
Hoxa3P02831 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Gm3375-201ENSMUST00000203929 796 ntBASIC14.59□□□□□ -0.07
Hoxa3P02831 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Odf3b-204ENSMUST00000227834 930 ntBASIC14.59□□□□□ -0.07
Hoxa3P02831 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Hoxa3P02831 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Tgds-204ENSMUST00000228543 1594 ntBASIC14.59□□□□□ -0.07
Hoxa3P02831 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.59□□□□□ -0.07
Hoxa3P02831 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.59□□□□□ -0.07
Hoxa3P02831 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.59□□□□□ -0.07
Hoxa3P02831 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxa3P02831 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxa3P02831 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.58□□□□□ -0.07
Hoxa3P02831 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxa3P02831 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxa3P02831 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.58□□□□□ -0.08
Hoxa3P02831 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Timm23-208ENSMUST00000226683 750 ntBASIC14.58□□□□□ -0.08
Hoxa3P02831 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxa3P02831 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxa3P02831 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Gm30025-201ENSMUST00000218555 728 ntBASIC14.57□□□□□ -0.08
Hoxa3P02831 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxa3P02831 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa3P02831 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.57□□□□□ -0.08
Hoxa3P02831 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.56□□□□□ -0.08
Hoxa3P02831 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa3P02831 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms