Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.41■□□□□ 0.06
NgfP01139 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NgfP01139 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.41■□□□□ 0.06
NgfP01139 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NgfP01139 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.41■□□□□ 0.06
NgfP01139 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NgfP01139 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NgfP01139 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Gm10566-201ENSMUST00000086739 996 ntBASIC15.41■□□□□ 0.06
NgfP01139 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NgfP01139 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
NgfP01139 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.4■□□□□ 0.06
NgfP01139 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Fst-202ENSMUST00000223640 2612 ntBASIC15.4■□□□□ 0.06
NgfP01139 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.4■□□□□ 0.06
NgfP01139 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NgfP01139 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NgfP01139 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NgfP01139 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NgfP01139 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.39■□□□□ 0.05
NgfP01139 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NgfP01139 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NgfP01139 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Gm11950-201ENSMUST00000121615 838 ntBASIC15.39■□□□□ 0.05
NgfP01139 Gm18958-201ENSMUST00000174258 762 ntBASIC15.39■□□□□ 0.05
NgfP01139 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.39■□□□□ 0.05
NgfP01139 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NgfP01139 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
NgfP01139 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NgfP01139 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.38■□□□□ 0.05
NgfP01139 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NgfP01139 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.38■□□□□ 0.05
NgfP01139 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NgfP01139 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NgfP01139 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.38■□□□□ 0.05
NgfP01139 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.38■□□□□ 0.05
NgfP01139 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.38■□□□□ 0.05
NgfP01139 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NgfP01139 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.37■□□□□ 0.05
NgfP01139 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NgfP01139 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.37■□□□□ 0.05
NgfP01139 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.37■□□□□ 0.05
NgfP01139 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NgfP01139 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NgfP01139 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NgfP01139 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NgfP01139 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms