Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Hcn1O88704 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hcn1O88704 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn1O88704 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.67■□□□□ 0.26
Hcn1O88704 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Gm22240-201ENSMUST00000175225 82 ntBASIC16.67■□□□□ 0.26
Hcn1O88704 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Zfp783-201ENSMUST00000095946 670 ntBASIC16.67■□□□□ 0.26
Hcn1O88704 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hcn1O88704 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn1O88704 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hcn1O88704 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.67■□□□□ 0.26
Hcn1O88704 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Hcn1O88704 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hcn1O88704 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn1O88704 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.66■□□□□ 0.26
Hcn1O88704 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hcn1O88704 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Hcn1O88704 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
Hcn1O88704 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.65■□□□□ 0.26
Hcn1O88704 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.65■□□□□ 0.26
Hcn1O88704 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hcn1O88704 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn1O88704 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hcn1O88704 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Gm5643-201ENSMUST00000117081 966 ntBASIC16.64■□□□□ 0.25
Hcn1O88704 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.64■□□□□ 0.25
Hcn1O88704 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.64■□□□□ 0.25
Hcn1O88704 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn1O88704 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hcn1O88704 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Hcn1O88704 Gm18666-201ENSMUST00000190039 958 ntBASIC16.63■□□□□ 0.25
Hcn1O88704 Gm38285-201ENSMUST00000192928 922 ntBASIC16.63■□□□□ 0.25
Hcn1O88704 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.63■□□□□ 0.25
Hcn1O88704 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn1O88704 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn1O88704 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms