Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.96■□□□□ 0.31
ClppO88696 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClppO88696 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClppO88696 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ClppO88696 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.96■□□□□ 0.3
ClppO88696 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.95■□□□□ 0.3
ClppO88696 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ClppO88696 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
ClppO88696 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ClppO88696 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.95■□□□□ 0.3
ClppO88696 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.95■□□□□ 0.3
ClppO88696 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ClppO88696 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.95■□□□□ 0.3
ClppO88696 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ClppO88696 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.94■□□□□ 0.3
ClppO88696 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ClppO88696 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.94■□□□□ 0.3
ClppO88696 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ClppO88696 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.94■□□□□ 0.3
ClppO88696 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClppO88696 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.93■□□□□ 0.3
ClppO88696 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ClppO88696 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.93■□□□□ 0.3
ClppO88696 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.93■□□□□ 0.3
ClppO88696 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ClppO88696 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClppO88696 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.92■□□□□ 0.3
ClppO88696 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ClppO88696 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.92■□□□□ 0.3
ClppO88696 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Gm9987-201ENSMUST00000069768 567 ntBASIC16.92■□□□□ 0.3
ClppO88696 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.92■□□□□ 0.3
ClppO88696 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ClppO88696 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.92■□□□□ 0.3
ClppO88696 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClppO88696 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.91■□□□□ 0.3
ClppO88696 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClppO88696 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms