Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.29■■□□□ 1
Cops6O88545 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.29■■□□□ 1
Cops6O88545 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Gm7284-201ENSMUST00000131667 944 ntBASIC21.29■■□□□ 1
Cops6O88545 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Cops6O88545 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cops6O88545 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.29■■□□□ 1
Cops6O88545 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cops6O88545 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cops6O88545 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cops6O88545 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Cops6O88545 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Cops6O88545 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.27■■□□□ 1
Cops6O88545 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Gm26039-201ENSMUST00000158152 144 ntBASIC21.27■■□□□ 1
Cops6O88545 Gm29518-201ENSMUST00000190858 372 ntBASIC21.27■■□□□ 1
Cops6O88545 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cops6O88545 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cops6O88545 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cops6O88545 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.26■□□□□ 0.99
Cops6O88545 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cops6O88545 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.26■□□□□ 0.99
Cops6O88545 Gm11355-201ENSMUST00000121120 306 ntBASIC21.26■□□□□ 0.99
Cops6O88545 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.26■□□□□ 0.99
Cops6O88545 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.26■□□□□ 0.99
Cops6O88545 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cops6O88545 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Gm27704-201ENSMUST00000185094 107 ntBASIC21.25■□□□□ 0.99
Cops6O88545 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.25■□□□□ 0.99
Cops6O88545 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.25■□□□□ 0.99
Cops6O88545 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.25■□□□□ 0.99
Cops6O88545 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cops6O88545 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Gm9103-201ENSMUST00000119371 405 ntBASIC21.24■□□□□ 0.99
Cops6O88545 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.24■□□□□ 0.99
Cops6O88545 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cops6O88545 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cops6O88545 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cops6O88545 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cops6O88545 Actl10-202ENSMUST00000226583 1501 ntBASIC21.24■□□□□ 0.99
Cops6O88545 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.23■□□□□ 0.99
Cops6O88545 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cops6O88545 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms