Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Gm13534-201ENSMUST00000121169 513 ntBASIC16.11■□□□□ 0.17
Cops4O88544 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.11■□□□□ 0.17
Cops4O88544 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.11■□□□□ 0.17
Cops4O88544 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.11■□□□□ 0.17
Cops4O88544 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cops4O88544 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cops4O88544 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cops4O88544 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops4O88544 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cops4O88544 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Gm10493-201ENSMUST00000097270 612 ntBASIC16.1■□□□□ 0.17
Cops4O88544 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cops4O88544 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cops4O88544 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.09■□□□□ 0.17
Cops4O88544 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.09■□□□□ 0.17
Cops4O88544 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cops4O88544 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.09■□□□□ 0.17
Cops4O88544 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cops4O88544 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cops4O88544 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cops4O88544 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Cops4O88544 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cops4O88544 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.08■□□□□ 0.16
Cops4O88544 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cops4O88544 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.08■□□□□ 0.16
Cops4O88544 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cops4O88544 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.08■□□□□ 0.16
Cops4O88544 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Cops4O88544 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.08■□□□□ 0.16
Cops4O88544 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.08■□□□□ 0.16
Cops4O88544 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cops4O88544 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cops4O88544 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.07■□□□□ 0.16
Cops4O88544 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.07■□□□□ 0.16
Cops4O88544 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cops4O88544 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.07■□□□□ 0.16
Cops4O88544 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cops4O88544 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cops4O88544 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cops4O88544 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.06■□□□□ 0.16
Cops4O88544 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cops4O88544 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cops4O88544 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cops4O88544 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cops4O88544 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms