Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cacna1hO88427 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cacna1hO88427 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1hO88427 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1hO88427 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.98■□□□□ 0.31
Cacna1hO88427 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cacna1hO88427 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1hO88427 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cacna1hO88427 Gm9727-201ENSMUST00000161387 555 ntBASIC16.97■□□□□ 0.31
Cacna1hO88427 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.97■□□□□ 0.31
Cacna1hO88427 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.97■□□□□ 0.31
Cacna1hO88427 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Gm27867-201ENSMUST00000184778 125 ntBASIC16.97■□□□□ 0.31
Cacna1hO88427 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cacna1hO88427 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cacna1hO88427 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cacna1hO88427 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.97■□□□□ 0.31
Cacna1hO88427 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.97■□□□□ 0.31
Cacna1hO88427 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.96■□□□□ 0.31
Cacna1hO88427 Gm15165-201ENSMUST00000118140 502 ntBASIC16.96■□□□□ 0.31
Cacna1hO88427 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.96■□□□□ 0.31
Cacna1hO88427 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.96■□□□□ 0.31
Cacna1hO88427 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.96■□□□□ 0.31
Cacna1hO88427 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cacna1hO88427 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cacna1hO88427 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
Cacna1hO88427 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.95■□□□□ 0.3
Cacna1hO88427 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.95■□□□□ 0.3
Cacna1hO88427 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Gm26308-201ENSMUST00000157768 69 ntBASIC16.95■□□□□ 0.3
Cacna1hO88427 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Cacna1hO88427 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cacna1hO88427 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.94■□□□□ 0.3
Cacna1hO88427 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Gm11336-201ENSMUST00000118168 334 ntBASIC16.94■□□□□ 0.3
Cacna1hO88427 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cacna1hO88427 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.94■□□□□ 0.3
Cacna1hO88427 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cacna1hO88427 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cacna1hO88427 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cacna1hO88427 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cacna1hO88427 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cacna1hO88427 Gm27397-201ENSMUST00000184997 107 ntBASIC16.93■□□□□ 0.3
Cacna1hO88427 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.93■□□□□ 0.3
Cacna1hO88427 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.93■□□□□ 0.3
Cacna1hO88427 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms