Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IkbkbO88351 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
IkbkbO88351 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IkbkbO88351 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IkbkbO88351 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IkbkbO88351 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
IkbkbO88351 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.25■□□□□ 0.67
IkbkbO88351 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IkbkbO88351 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IkbkbO88351 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IkbkbO88351 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IkbkbO88351 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Idnk-204ENSMUST00000226010 1898 ntBASIC19.24■□□□□ 0.67
IkbkbO88351 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IkbkbO88351 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.24■□□□□ 0.67
IkbkbO88351 Gm37292-201ENSMUST00000192062 758 ntBASIC19.24■□□□□ 0.67
IkbkbO88351 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IkbkbO88351 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IkbkbO88351 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IkbkbO88351 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IkbkbO88351 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IkbkbO88351 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.23■□□□□ 0.67
IkbkbO88351 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
IkbkbO88351 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.23■□□□□ 0.67
IkbkbO88351 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IkbkbO88351 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.22■□□□□ 0.67
IkbkbO88351 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.22■□□□□ 0.67
IkbkbO88351 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.22■□□□□ 0.67
IkbkbO88351 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IkbkbO88351 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.22■□□□□ 0.67
IkbkbO88351 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IkbkbO88351 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.22■□□□□ 0.67
IkbkbO88351 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
IkbkbO88351 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IkbkbO88351 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.21■□□□□ 0.67
IkbkbO88351 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.21■□□□□ 0.67
IkbkbO88351 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IkbkbO88351 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.2■□□□□ 0.66
IkbkbO88351 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IkbkbO88351 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.2■□□□□ 0.66
IkbkbO88351 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IkbkbO88351 Mir2861-201ENSMUST00000175539 82 ntBASIC19.2■□□□□ 0.66
IkbkbO88351 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms