Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rpl35aO55142 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpl35aO55142 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.97□□□□□ -0.33
Rpl35aO55142 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Grk6-206ENSMUST00000224995 2971 ntBASIC12.97□□□□□ -0.33
Rpl35aO55142 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rpl35aO55142 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.96□□□□□ -0.33
Rpl35aO55142 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.96□□□□□ -0.33
Rpl35aO55142 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpl35aO55142 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.96□□□□□ -0.33
Rpl35aO55142 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.96□□□□□ -0.33
Rpl35aO55142 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.96□□□□□ -0.33
Rpl35aO55142 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rpl35aO55142 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.96□□□□□ -0.33
Rpl35aO55142 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.96□□□□□ -0.33
Rpl35aO55142 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rpl35aO55142 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.96□□□□□ -0.33
Rpl35aO55142 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rpl35aO55142 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpl35aO55142 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rpl35aO55142 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rpl35aO55142 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.96□□□□□ -0.34
Rpl35aO55142 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rpl35aO55142 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Gm715-201ENSMUST00000117865 831 ntBASIC12.95□□□□□ -0.34
Rpl35aO55142 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Rpl35aO55142 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.95□□□□□ -0.34
Rpl35aO55142 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rpl35aO55142 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.95□□□□□ -0.34
Rpl35aO55142 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpl35aO55142 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rpl35aO55142 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rpl35aO55142 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.94□□□□□ -0.34
Rpl35aO55142 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpl35aO55142 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl35aO55142 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms