Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.44□□□□□ -0.1
SncaO55042 Idnk-204ENSMUST00000226010 1898 ntBASIC14.44□□□□□ -0.1
SncaO55042 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.44□□□□□ -0.1
SncaO55042 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.44□□□□□ -0.1
SncaO55042 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.44□□□□□ -0.1
SncaO55042 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SncaO55042 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Gm6365-201ENSMUST00000054711 744 ntBASIC14.44□□□□□ -0.1
SncaO55042 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SncaO55042 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SncaO55042 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SncaO55042 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SncaO55042 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.43□□□□□ -0.1
SncaO55042 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.43□□□□□ -0.1
SncaO55042 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SncaO55042 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SncaO55042 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.42□□□□□ -0.1
SncaO55042 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.42□□□□□ -0.1
SncaO55042 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SncaO55042 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.42□□□□□ -0.1
SncaO55042 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.42□□□□□ -0.1
SncaO55042 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.42□□□□□ -0.1
SncaO55042 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.42□□□□□ -0.1
SncaO55042 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SncaO55042 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SncaO55042 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SncaO55042 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
SncaO55042 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SncaO55042 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.41□□□□□ -0.1
SncaO55042 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SncaO55042 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SncaO55042 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SncaO55042 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SncaO55042 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SncaO55042 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.4□□□□□ -0.1
SncaO55042 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms