Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf13O54965 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf13O54965 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf13O54965 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf13O54965 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf13O54965 Gm10033-202ENSMUST00000211874 928 ntBASIC15.82■□□□□ 0.12
Rnf13O54965 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf13O54965 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf13O54965 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf13O54965 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf13O54965 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf13O54965 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Gm42642-201ENSMUST00000200683 355 ntBASIC15.81■□□□□ 0.12
Rnf13O54965 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf13O54965 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf13O54965 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf13O54965 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf13O54965 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf13O54965 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf13O54965 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rnf13O54965 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf13O54965 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf13O54965 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf13O54965 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf13O54965 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf13O54965 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf13O54965 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf13O54965 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf13O54965 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf13O54965 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf13O54965 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf13O54965 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf13O54965 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf13O54965 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.78■□□□□ 0.12
Rnf13O54965 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf13O54965 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.78■□□□□ 0.12
Rnf13O54965 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf13O54965 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.78■□□□□ 0.12
Rnf13O54965 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf13O54965 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf13O54965 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf13O54965 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms