Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.75■□□□□ 0.43
Banf1O54962 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.74■□□□□ 0.43
Banf1O54962 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.74■□□□□ 0.43
Banf1O54962 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.74■□□□□ 0.43
Banf1O54962 Gm11927-201ENSMUST00000118472 759 ntBASIC17.74■□□□□ 0.43
Banf1O54962 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.74■□□□□ 0.43
Banf1O54962 Rab3c-203ENSMUST00000224180 967 ntBASIC17.74■□□□□ 0.43
Banf1O54962 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Banf1O54962 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Banf1O54962 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Banf1O54962 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.73■□□□□ 0.43
Banf1O54962 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.73■□□□□ 0.43
Banf1O54962 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Banf1O54962 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
Banf1O54962 Mir5133-201ENSMUST00000174955 77 ntBASIC17.73■□□□□ 0.43
Banf1O54962 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.73■□□□□ 0.43
Banf1O54962 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.73■□□□□ 0.43
Banf1O54962 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Banf1O54962 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Banf1O54962 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Banf1O54962 Flg-201ENSMUST00000050758 1488 ntBASIC17.73■□□□□ 0.43
Banf1O54962 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.73■□□□□ 0.43
Banf1O54962 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Banf1O54962 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Banf1O54962 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Banf1O54962 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Gm27405-201ENSMUST00000184201 112 ntBASIC17.72■□□□□ 0.43
Banf1O54962 Gm8495-201ENSMUST00000188740 694 ntBASIC17.72■□□□□ 0.43
Banf1O54962 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Banf1O54962 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.72■□□□□ 0.43
Banf1O54962 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Banf1O54962 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Banf1O54962 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.71■□□□□ 0.43
Banf1O54962 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.71■□□□□ 0.43
Banf1O54962 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.71■□□□□ 0.43
Banf1O54962 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Banf1O54962 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Banf1O54962 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Banf1O54962 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.7■□□□□ 0.42
Banf1O54962 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Banf1O54962 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Banf1O54962 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Banf1O54962 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Banf1O54962 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.7■□□□□ 0.42
Banf1O54962 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Banf1O54962 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms