Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.17■□□□□ 0.5
Per2O54943 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Per2O54943 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.16■□□□□ 0.5
Per2O54943 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Per2O54943 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.16■□□□□ 0.5
Per2O54943 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Per2O54943 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.15■□□□□ 0.5
Per2O54943 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Per2O54943 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Per2O54943 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Gm18666-201ENSMUST00000190039 958 ntBASIC18.15■□□□□ 0.5
Per2O54943 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Per2O54943 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Per2O54943 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Per2O54943 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.14■□□□□ 0.5
Per2O54943 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Per2O54943 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.14■□□□□ 0.49
Per2O54943 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Gm6576-201ENSMUST00000169678 883 ntBASIC18.14■□□□□ 0.49
Per2O54943 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Trmt13-210ENSMUST00000198454 880 ntBASIC18.14■□□□□ 0.49
Per2O54943 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Per2O54943 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Per2O54943 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Per2O54943 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.13■□□□□ 0.49
Per2O54943 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.13■□□□□ 0.49
Per2O54943 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.13■□□□□ 0.49
Per2O54943 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.13■□□□□ 0.49
Per2O54943 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.13■□□□□ 0.49
Per2O54943 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Per2O54943 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Per2O54943 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Per2O54943 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Per2O54943 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Per2O54943 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.12■□□□□ 0.49
Per2O54943 Gm37856-201ENSMUST00000191634 999 ntBASIC18.12■□□□□ 0.49
Per2O54943 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.12■□□□□ 0.49
Per2O54943 Gm18025-201ENSMUST00000221733 862 ntBASIC18.12■□□□□ 0.49
Per2O54943 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Per2O54943 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms