Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Smarce1O54941 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Smarce1O54941 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarce1O54941 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarce1O54941 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarce1O54941 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smarce1O54941 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.73■□□□□ 0.91
Smarce1O54941 Mir5133-201ENSMUST00000174955 77 ntBASIC20.73■□□□□ 0.91
Smarce1O54941 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smarce1O54941 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarce1O54941 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.73■□□□□ 0.91
Smarce1O54941 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smarce1O54941 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smarce1O54941 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smarce1O54941 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smarce1O54941 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smarce1O54941 Gm11927-201ENSMUST00000118472 759 ntBASIC20.72■□□□□ 0.91
Smarce1O54941 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smarce1O54941 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.72■□□□□ 0.91
Smarce1O54941 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smarce1O54941 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarce1O54941 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smarce1O54941 Gm13148-201ENSMUST00000118892 745 ntBASIC20.71■□□□□ 0.91
Smarce1O54941 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarce1O54941 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarce1O54941 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarce1O54941 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.7■□□□□ 0.91
Smarce1O54941 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarce1O54941 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.7■□□□□ 0.9
Smarce1O54941 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.7■□□□□ 0.9
Smarce1O54941 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.7■□□□□ 0.9
Smarce1O54941 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Smarce1O54941 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Smarce1O54941 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarce1O54941 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarce1O54941 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smarce1O54941 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smarce1O54941 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.69■□□□□ 0.9
Smarce1O54941 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.69■□□□□ 0.9
Smarce1O54941 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smarce1O54941 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Smarce1O54941 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarce1O54941 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms