Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Npc1O35604 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.98■□□□□ 0.31
Npc1O35604 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.98■□□□□ 0.31
Npc1O35604 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.98■□□□□ 0.31
Npc1O35604 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Npc1O35604 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.97■□□□□ 0.31
Npc1O35604 Gm29791-202ENSMUST00000207888 369 ntBASIC16.97■□□□□ 0.31
Npc1O35604 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.97■□□□□ 0.31
Npc1O35604 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Npc1O35604 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Npc1O35604 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.96■□□□□ 0.31
Npc1O35604 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Npc1O35604 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
Npc1O35604 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Npc1O35604 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.96■□□□□ 0.31
Npc1O35604 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.96■□□□□ 0.31
Npc1O35604 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Npc1O35604 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Npc1O35604 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Npc1O35604 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Npc1O35604 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Npc1O35604 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Npc1O35604 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Npc1O35604 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Npc1O35604 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Npc1O35604 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.95■□□□□ 0.3
Npc1O35604 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Npc1O35604 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.95■□□□□ 0.3
Npc1O35604 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.95■□□□□ 0.3
Npc1O35604 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Npc1O35604 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Gm8969-201ENSMUST00000199694 526 ntBASIC16.95■□□□□ 0.3
Npc1O35604 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.95■□□□□ 0.3
Npc1O35604 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Npc1O35604 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Npc1O35604 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Npc1O35604 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.94■□□□□ 0.3
Npc1O35604 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.94■□□□□ 0.3
Npc1O35604 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.94■□□□□ 0.3
Npc1O35604 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Npc1O35604 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Npc1O35604 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Npc1O35604 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms