Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm13036-201ENSMUST00000117799 748 ntBASIC16.4■□□□□ 0.22
Abca4O35600 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.4■□□□□ 0.22
Abca4O35600 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Abca4O35600 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abca4O35600 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Gm11336-201ENSMUST00000118168 334 ntBASIC16.39■□□□□ 0.21
Abca4O35600 Gm14140-201ENSMUST00000119999 995 ntBASIC16.39■□□□□ 0.21
Abca4O35600 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Abca4O35600 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.39■□□□□ 0.21
Abca4O35600 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Abca4O35600 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Abca4O35600 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.39■□□□□ 0.21
Abca4O35600 Chchd1-203ENSMUST00000224633 557 ntBASIC16.39■□□□□ 0.21
Abca4O35600 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abca4O35600 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.38■□□□□ 0.21
Abca4O35600 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.38■□□□□ 0.21
Abca4O35600 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abca4O35600 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Abca4O35600 Rprl3-201ENSMUST00000157400 290 ntBASIC16.37■□□□□ 0.21
Abca4O35600 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.37■□□□□ 0.21
Abca4O35600 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Abca4O35600 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.37■□□□□ 0.21
Abca4O35600 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Abca4O35600 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.37■□□□□ 0.21
Abca4O35600 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Abca4O35600 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Abca4O35600 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.36■□□□□ 0.21
Abca4O35600 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Abca4O35600 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Abca4O35600 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Abca4O35600 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.36■□□□□ 0.21
Abca4O35600 Gm11025-201ENSMUST00000140773 466 ntBASIC16.36■□□□□ 0.21
Abca4O35600 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
Abca4O35600 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.36■□□□□ 0.21
Abca4O35600 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Abca4O35600 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Abca4O35600 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abca4O35600 Gm14701-201ENSMUST00000117156 348 ntBASIC16.35■□□□□ 0.21
Abca4O35600 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.35■□□□□ 0.21
Abca4O35600 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.35■□□□□ 0.21
Abca4O35600 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Abca4O35600 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Abca4O35600 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Abca4O35600 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Abca4O35600 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Abca4O35600 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.34■□□□□ 0.21
Abca4O35600 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.34■□□□□ 0.21
Abca4O35600 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Gm27000-201ENSMUST00000182943 842 ntBASIC16.34■□□□□ 0.21
Abca4O35600 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Abca4O35600 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Abca4O35600 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Abca4O35600 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Abca4O35600 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Abca4O35600 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Abca4O35600 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Abca4O35600 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Abca4O35600 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Abca4O35600 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Abca4O35600 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms