Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Stx1aO35526 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Stx1aO35526 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Stx1aO35526 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.61■□□□□ 0.73
Stx1aO35526 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Gm2399-201ENSMUST00000104944 225 ntBASIC19.6■□□□□ 0.73
Stx1aO35526 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.6■□□□□ 0.73
Stx1aO35526 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.6■□□□□ 0.73
Stx1aO35526 Gm18671-201ENSMUST00000214826 683 ntBASIC19.6■□□□□ 0.73
Stx1aO35526 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Stx1aO35526 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.6■□□□□ 0.73
Stx1aO35526 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Stx1aO35526 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stx1aO35526 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Stx1aO35526 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.59■□□□□ 0.73
Stx1aO35526 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stx1aO35526 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stx1aO35526 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Stx1aO35526 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stx1aO35526 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stx1aO35526 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Stx1aO35526 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.58■□□□□ 0.73
Stx1aO35526 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Stx1aO35526 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.58■□□□□ 0.72
Stx1aO35526 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stx1aO35526 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stx1aO35526 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Stx1aO35526 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stx1aO35526 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.57■□□□□ 0.72
Stx1aO35526 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.57■□□□□ 0.72
Stx1aO35526 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.57■□□□□ 0.72
Stx1aO35526 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.57■□□□□ 0.72
Stx1aO35526 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stx1aO35526 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stx1aO35526 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Stx1aO35526 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Stx1aO35526 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Gm7291-201ENSMUST00000199147 382 ntBASIC19.56■□□□□ 0.72
Stx1aO35526 Zfp783-201ENSMUST00000095946 670 ntBASIC19.56■□□□□ 0.72
Stx1aO35526 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Stx1aO35526 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
Stx1aO35526 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Stx1aO35526 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stx1aO35526 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Stx1aO35526 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Stx1aO35526 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms