Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Clk4O35493 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clk4O35493 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.7■□□□□ 0.26
Clk4O35493 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.7■□□□□ 0.26
Clk4O35493 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clk4O35493 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clk4O35493 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Clk4O35493 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clk4O35493 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Gm10698-201ENSMUST00000182663 604 ntBASIC16.69■□□□□ 0.26
Clk4O35493 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.69■□□□□ 0.26
Clk4O35493 Gm10812-201ENSMUST00000099864 546 ntBASIC16.69■□□□□ 0.26
Clk4O35493 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clk4O35493 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clk4O35493 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Clk4O35493 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Clk4O35493 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.69■□□□□ 0.26
Clk4O35493 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.68■□□□□ 0.26
Clk4O35493 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.68■□□□□ 0.26
Clk4O35493 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.68■□□□□ 0.26
Clk4O35493 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clk4O35493 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clk4O35493 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.67■□□□□ 0.26
Clk4O35493 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.67■□□□□ 0.26
Clk4O35493 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clk4O35493 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.67■□□□□ 0.26
Clk4O35493 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clk4O35493 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clk4O35493 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Clk4O35493 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Clk4O35493 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.66■□□□□ 0.26
Clk4O35493 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clk4O35493 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.65■□□□□ 0.26
Clk4O35493 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.65■□□□□ 0.26
Clk4O35493 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clk4O35493 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clk4O35493 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms