Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfsf11O35235 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.62□□□□□ -0.23
Tnfsf11O35235 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.62□□□□□ -0.23
Tnfsf11O35235 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Gm40848-201ENSMUST00000221998 324 ntBASIC13.62□□□□□ -0.23
Tnfsf11O35235 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.62□□□□□ -0.23
Tnfsf11O35235 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.62□□□□□ -0.23
Tnfsf11O35235 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfsf11O35235 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf11O35235 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfsf11O35235 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.6□□□□□ -0.23
Tnfsf11O35235 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Gm22325-201ENSMUST00000158904 308 ntBASIC13.6□□□□□ -0.23
Tnfsf11O35235 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.6□□□□□ -0.23
Tnfsf11O35235 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfsf11O35235 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tnfsf11O35235 Gm45417-201ENSMUST00000209533 758 ntBASIC13.59□□□□□ -0.23
Tnfsf11O35235 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms