Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Sh2b3O09039 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.5■□□□□ 0.07
Sh2b3O09039 Gm43799-201ENSMUST00000201845 579 ntBASIC15.5■□□□□ 0.07
Sh2b3O09039 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.5■□□□□ 0.07
Sh2b3O09039 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2b3O09039 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.5■□□□□ 0.07
Sh2b3O09039 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh2b3O09039 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sh2b3O09039 Gm30025-201ENSMUST00000218555 728 ntBASIC15.49■□□□□ 0.07
Sh2b3O09039 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.49■□□□□ 0.07
Sh2b3O09039 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh2b3O09039 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sh2b3O09039 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2b3O09039 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.48■□□□□ 0.07
Sh2b3O09039 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Sh2b3O09039 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Gm12382-201ENSMUST00000122005 922 ntBASIC15.48■□□□□ 0.07
Sh2b3O09039 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.48■□□□□ 0.07
Sh2b3O09039 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Sh2b3O09039 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Sh2b3O09039 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2b3O09039 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.48■□□□□ 0.07
Sh2b3O09039 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.48■□□□□ 0.07
Sh2b3O09039 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.47■□□□□ 0.07
Sh2b3O09039 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sh2b3O09039 Mir6349-201ENSMUST00000184059 97 ntBASIC15.47■□□□□ 0.07
Sh2b3O09039 Gm37292-201ENSMUST00000192062 758 ntBASIC15.47■□□□□ 0.07
Sh2b3O09039 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sh2b3O09039 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Sh2b3O09039 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.47■□□□□ 0.07
Sh2b3O09039 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2b3O09039 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Sh2b3O09039 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh2b3O09039 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh2b3O09039 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Gm21814-202ENSMUST00000203277 873 ntBASIC15.46■□□□□ 0.07
Sh2b3O09039 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Sh2b3O09039 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sh2b3O09039 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2b3O09039 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh2b3O09039 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
Sh2b3O09039 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh2b3O09039 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms