Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc2O08811 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Ercc2O08811 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.83■□□□□ 0.44
Ercc2O08811 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.83■□□□□ 0.44
Ercc2O08811 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ercc2O08811 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.83■□□□□ 0.44
Ercc2O08811 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc2O08811 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ercc2O08811 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.82■□□□□ 0.44
Ercc2O08811 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ercc2O08811 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ercc2O08811 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.82■□□□□ 0.44
Ercc2O08811 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc2O08811 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ercc2O08811 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ercc2O08811 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.81■□□□□ 0.44
Ercc2O08811 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.81■□□□□ 0.44
Ercc2O08811 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.81■□□□□ 0.44
Ercc2O08811 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc2O08811 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.8■□□□□ 0.44
Ercc2O08811 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.8■□□□□ 0.44
Ercc2O08811 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ercc2O08811 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc2O08811 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ercc2O08811 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.79■□□□□ 0.44
Ercc2O08811 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.79■□□□□ 0.44
Ercc2O08811 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Ercc2O08811 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc2O08811 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ercc2O08811 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.79■□□□□ 0.44
Ercc2O08811 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ercc2O08811 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.78■□□□□ 0.44
Ercc2O08811 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.78■□□□□ 0.44
Ercc2O08811 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.78■□□□□ 0.44
Ercc2O08811 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.78■□□□□ 0.44
Ercc2O08811 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.78■□□□□ 0.44
Ercc2O08811 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Ercc2O08811 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc2O08811 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms