Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.06■□□□□ 0.48
Ebf3O08791 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.06■□□□□ 0.48
Ebf3O08791 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ebf3O08791 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ebf3O08791 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ebf3O08791 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.05■□□□□ 0.48
Ebf3O08791 Gm10013-201ENSMUST00000106074 672 ntBASIC18.05■□□□□ 0.48
Ebf3O08791 Mir5130-201ENSMUST00000175160 84 ntBASIC18.05■□□□□ 0.48
Ebf3O08791 Gm18032-201ENSMUST00000222541 538 ntBASIC18.05■□□□□ 0.48
Ebf3O08791 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.05■□□□□ 0.48
Ebf3O08791 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ebf3O08791 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.05■□□□□ 0.48
Ebf3O08791 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ebf3O08791 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ebf3O08791 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ebf3O08791 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.04■□□□□ 0.48
Ebf3O08791 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.04■□□□□ 0.48
Ebf3O08791 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ebf3O08791 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Gm2274-201ENSMUST00000184539 609 ntBASIC18.04■□□□□ 0.48
Ebf3O08791 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ebf3O08791 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.04■□□□□ 0.48
Ebf3O08791 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ebf3O08791 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ebf3O08791 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.04■□□□□ 0.48
Ebf3O08791 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.03■□□□□ 0.48
Ebf3O08791 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ebf3O08791 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Gm4974-201ENSMUST00000209974 875 ntBASIC18.03■□□□□ 0.48
Ebf3O08791 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.03■□□□□ 0.48
Ebf3O08791 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ebf3O08791 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.03■□□□□ 0.48
Ebf3O08791 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Ebf3O08791 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.02■□□□□ 0.48
Ebf3O08791 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.02■□□□□ 0.48
Ebf3O08791 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ebf3O08791 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ebf3O08791 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.02■□□□□ 0.48
Ebf3O08791 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ebf3O08791 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf3O08791 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf3O08791 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf3O08791 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.02■□□□□ 0.47
Ebf3O08791 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ebf3O08791 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ebf3O08791 AA414768-201ENSMUST00000121924 1257 ntBASIC18.01■□□□□ 0.47
Ebf3O08791 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms