Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
ClockO08785 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.58■□□□□ 0.24
ClockO08785 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClockO08785 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ClockO08785 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ClockO08785 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ClockO08785 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.57■□□□□ 0.24
ClockO08785 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ClockO08785 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ClockO08785 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.57■□□□□ 0.24
ClockO08785 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Gm43060-201ENSMUST00000200621 289 ntBASIC16.57■□□□□ 0.24
ClockO08785 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.57■□□□□ 0.24
ClockO08785 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.57■□□□□ 0.24
ClockO08785 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ClockO08785 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
ClockO08785 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
ClockO08785 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.56■□□□□ 0.24
ClockO08785 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Gm13146-201ENSMUST00000118508 780 ntBASIC16.56■□□□□ 0.24
ClockO08785 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ClockO08785 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.56■□□□□ 0.24
ClockO08785 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ClockO08785 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.56■□□□□ 0.24
ClockO08785 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.55■□□□□ 0.24
ClockO08785 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.55■□□□□ 0.24
ClockO08785 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Gm13534-201ENSMUST00000121169 513 ntBASIC16.55■□□□□ 0.24
ClockO08785 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.55■□□□□ 0.24
ClockO08785 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClockO08785 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.54■□□□□ 0.24
ClockO08785 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.54■□□□□ 0.24
ClockO08785 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ClockO08785 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ClockO08785 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClockO08785 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ClockO08785 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ClockO08785 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClockO08785 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.53■□□□□ 0.24
ClockO08785 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ClockO08785 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClockO08785 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ClockO08785 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ClockO08785 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ClockO08785 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.53■□□□□ 0.24
ClockO08785 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ClockO08785 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.53■□□□□ 0.24
ClockO08785 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms