Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tcof1O08784 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tcof1O08784 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tcof1O08784 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tcof1O08784 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tcof1O08784 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.38■□□□□ 0.85
Tcof1O08784 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.38■□□□□ 0.85
Tcof1O08784 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tcof1O08784 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tcof1O08784 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.38■□□□□ 0.85
Tcof1O08784 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tcof1O08784 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcof1O08784 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Tcof1O08784 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Tcof1O08784 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.37■□□□□ 0.85
Tcof1O08784 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tcof1O08784 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.37■□□□□ 0.85
Tcof1O08784 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.37■□□□□ 0.85
Tcof1O08784 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcof1O08784 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.36■□□□□ 0.85
Tcof1O08784 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.36■□□□□ 0.85
Tcof1O08784 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tcof1O08784 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcof1O08784 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tcof1O08784 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Tcof1O08784 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tcof1O08784 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tcof1O08784 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.35■□□□□ 0.85
Tcof1O08784 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tcof1O08784 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.35■□□□□ 0.85
Tcof1O08784 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.34■□□□□ 0.85
Tcof1O08784 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.34■□□□□ 0.85
Tcof1O08784 Gm7889-201ENSMUST00000185591 958 ntBASIC20.34■□□□□ 0.85
Tcof1O08784 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.34■□□□□ 0.85
Tcof1O08784 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.34■□□□□ 0.85
Tcof1O08784 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcof1O08784 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tcof1O08784 Gm7638-201ENSMUST00000121348 967 ntBASIC20.33■□□□□ 0.85
Tcof1O08784 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.33■□□□□ 0.85
Tcof1O08784 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tcof1O08784 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.33■□□□□ 0.85
Tcof1O08784 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tcof1O08784 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.33■□□□□ 0.85
Tcof1O08784 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms