Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm37179-201ENSMUST00000194862 823 ntBASIC18.86■□□□□ 0.61
Ube3aO08759 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.86■□□□□ 0.61
Ube3aO08759 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ube3aO08759 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ube3aO08759 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ube3aO08759 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.85■□□□□ 0.61
Ube3aO08759 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.85■□□□□ 0.61
Ube3aO08759 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.85■□□□□ 0.61
Ube3aO08759 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube3aO08759 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3aO08759 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.84■□□□□ 0.61
Ube3aO08759 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
Ube3aO08759 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ube3aO08759 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Mir8112-201ENSMUST00000184382 131 ntBASIC18.84■□□□□ 0.61
Ube3aO08759 Gm29791-202ENSMUST00000207888 369 ntBASIC18.84■□□□□ 0.61
Ube3aO08759 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ube3aO08759 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ube3aO08759 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.84■□□□□ 0.61
Ube3aO08759 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube3aO08759 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3aO08759 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.83■□□□□ 0.61
Ube3aO08759 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.83■□□□□ 0.61
Ube3aO08759 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube3aO08759 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.83■□□□□ 0.6
Ube3aO08759 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube3aO08759 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube3aO08759 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ube3aO08759 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.83■□□□□ 0.6
Ube3aO08759 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube3aO08759 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Haglr-201ENSMUST00000100000 2085 ntBASIC18.82■□□□□ 0.6
Ube3aO08759 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ube3aO08759 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Ube3aO08759 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube3aO08759 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.81■□□□□ 0.6
Ube3aO08759 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube3aO08759 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.81■□□□□ 0.6
Ube3aO08759 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.81■□□□□ 0.6
Ube3aO08759 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3aO08759 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms