Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ccdc180J3QNE4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc180J3QNE4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc180J3QNE4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc180J3QNE4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc180J3QNE4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ccdc180J3QNE4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Gm15794-201ENSMUST00000120182 631 ntBASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ccdc180J3QNE4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc180J3QNE4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc180J3QNE4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc180J3QNE4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc180J3QNE4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ccdc180J3QNE4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Gm7461-201ENSMUST00000058918 827 ntBASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Ccdc180J3QNE4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ccdc180J3QNE4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC31.74■■■□□ 2.67
Ccdc180J3QNE4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Gm24589-201ENSMUST00000116692 94 ntBASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Gm45141-201ENSMUST00000206502 1888 ntBASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccdc180J3QNE4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC31.72■■■□□ 2.67
Ccdc180J3QNE4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 Gm45328-201ENSMUST00000210942 917 ntBASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ccdc180J3QNE4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ccdc180J3QNE4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC31.7■■■□□ 2.67
Ccdc180J3QNE4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
Ccdc180J3QNE4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Ccdc180J3QNE4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.66
Ccdc180J3QNE4 Olfr129-201ENSMUST00000122318 993 ntBASIC31.7■■■□□ 2.66
Ccdc180J3QNE4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ccdc180J3QNE4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ccdc180J3QNE4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms