Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Serp2-204ENSMUST00000228055 705 ntBASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim55G3X8Y1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim55G3X8Y1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim55G3X8Y1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim55G3X8Y1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim55G3X8Y1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim55G3X8Y1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms