Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.9■□□□□ 0.46
Atf6F6VAN0 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.9■□□□□ 0.46
Atf6F6VAN0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf6F6VAN0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Atf6F6VAN0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Atf6F6VAN0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.89■□□□□ 0.45
Atf6F6VAN0 Gm42545-201ENSMUST00000202755 922 ntBASIC17.89■□□□□ 0.45
Atf6F6VAN0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.89■□□□□ 0.45
Atf6F6VAN0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Atf6F6VAN0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atf6F6VAN0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.87■□□□□ 0.45
Atf6F6VAN0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.87■□□□□ 0.45
Atf6F6VAN0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.87■□□□□ 0.45
Atf6F6VAN0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.87■□□□□ 0.45
Atf6F6VAN0 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.87■□□□□ 0.45
Atf6F6VAN0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atf6F6VAN0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.86■□□□□ 0.45
Atf6F6VAN0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.86■□□□□ 0.45
Atf6F6VAN0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atf6F6VAN0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Gm10653-202ENSMUST00000139570 835 ntBASIC17.85■□□□□ 0.45
Atf6F6VAN0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atf6F6VAN0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms