Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Golph3-205ENSMUST00000228671 2842 ntBASIC15.56■□□□□ 0.08
Shank1D3YZU1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Gm6443-201ENSMUST00000203599 874 ntBASIC15.56■□□□□ 0.08
Shank1D3YZU1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Shank1D3YZU1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Gm27459-201ENSMUST00000184860 107 ntBASIC15.55■□□□□ 0.08
Shank1D3YZU1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Gm43514-201ENSMUST00000198852 424 ntBASIC15.55■□□□□ 0.08
Shank1D3YZU1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Shank1D3YZU1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Il3ra-202ENSMUST00000223589 738 ntBASIC15.54■□□□□ 0.08
Shank1D3YZU1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Shank1D3YZU1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Gm37722-201ENSMUST00000193757 208 ntBASIC15.53■□□□□ 0.08
Shank1D3YZU1 Birc2-201ENSMUST00000054878 378 ntBASIC15.53■□□□□ 0.08
Shank1D3YZU1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Gm10418-201ENSMUST00000100943 576 ntBASIC15.53■□□□□ 0.08
Shank1D3YZU1 Mir770-201ENSMUST00000103252 94 ntBASIC15.53■□□□□ 0.08
Shank1D3YZU1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Shank1D3YZU1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Shank1D3YZU1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.52■□□□□ 0.08
Shank1D3YZU1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.52■□□□□ 0.08
Shank1D3YZU1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Shank1D3YZU1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shank1D3YZU1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shank1D3YZU1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Shank1D3YZU1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.52■□□□□ 0.07
Shank1D3YZU1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.51■□□□□ 0.07
Shank1D3YZU1 Gm27742-201ENSMUST00000184667 60 ntBASIC15.51■□□□□ 0.07
Shank1D3YZU1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shank1D3YZU1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms