Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp42B2RQC2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Usp42B2RQC2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.36■□□□□ 0.85
Usp42B2RQC2 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.36■□□□□ 0.85
Usp42B2RQC2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp42B2RQC2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp42B2RQC2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Gm17661-201ENSMUST00000170317 270 ntBASIC20.34■□□□□ 0.85
Usp42B2RQC2 Gm37025-201ENSMUST00000195159 829 ntBASIC20.34■□□□□ 0.85
Usp42B2RQC2 Gm10252-201ENSMUST00000209541 832 ntBASIC20.34■□□□□ 0.85
Usp42B2RQC2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp42B2RQC2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Gm7638-201ENSMUST00000121348 967 ntBASIC20.33■□□□□ 0.85
Usp42B2RQC2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Usp42B2RQC2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp42B2RQC2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp42B2RQC2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.33■□□□□ 0.84
Usp42B2RQC2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Usp42B2RQC2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp42B2RQC2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp42B2RQC2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Gm37055-201ENSMUST00000191866 133 ntBASIC20.32■□□□□ 0.84
Usp42B2RQC2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp42B2RQC2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.32■□□□□ 0.84
Usp42B2RQC2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp42B2RQC2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp42B2RQC2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp42B2RQC2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp42B2RQC2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp42B2RQC2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp42B2RQC2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp42B2RQC2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms