Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm12887B1AVM1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm12887B1AVM1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm12887B1AVM1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Gm26833-201ENSMUST00000180899 440 ntBASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm12887B1AVM1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm12887B1AVM1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms