Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Mir8098-201ENSMUST00000184011 137 ntBASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Gm28659-201ENSMUST00000188013 759 ntBASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.98■□□□□ 0.47
Col4a6B1AVK5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Gm13884-201ENSMUST00000118103 829 ntBASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a6B1AVK5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a6B1AVK5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Col4a6B1AVK5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Col4a6B1AVK5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a6B1AVK5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Col4a6B1AVK5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a6B1AVK5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a6B1AVK5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm13186-201ENSMUST00000118031 316 ntBASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm12895-201ENSMUST00000122214 226 ntBASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a6B1AVK5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a6B1AVK5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms