Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a5A6H584 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a5A6H584 Golph3-205ENSMUST00000228671 2842 ntBASIC13.17□□□□□ -0.3
Col6a5A6H584 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Gm27397-201ENSMUST00000184997 107 ntBASIC13.17□□□□□ -0.3
Col6a5A6H584 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a5A6H584 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.17□□□□□ -0.3
Col6a5A6H584 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Gm11025-201ENSMUST00000140773 466 ntBASIC13.17□□□□□ -0.3
Col6a5A6H584 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Gm43767-201ENSMUST00000198933 381 ntBASIC13.17□□□□□ -0.3
Col6a5A6H584 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Col6a5A6H584 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a5A6H584 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Gm11336-201ENSMUST00000118168 334 ntBASIC13.16□□□□□ -0.3
Col6a5A6H584 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.16□□□□□ -0.3
Col6a5A6H584 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.16□□□□□ -0.3
Col6a5A6H584 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col6a5A6H584 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a5A6H584 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.15□□□□□ -0.3
Col6a5A6H584 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.15□□□□□ -0.3
Col6a5A6H584 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.15□□□□□ -0.3
Col6a5A6H584 Gm6296-201ENSMUST00000222599 943 ntBASIC13.15□□□□□ -0.3
Col6a5A6H584 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.15□□□□□ -0.3
Col6a5A6H584 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a5A6H584 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a5A6H584 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Col6a5A6H584 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col6a5A6H584 Gm37025-201ENSMUST00000195159 829 ntBASIC13.14□□□□□ -0.31
Col6a5A6H584 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.14□□□□□ -0.31
Col6a5A6H584 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a5A6H584 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.14□□□□□ -0.31
Col6a5A6H584 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Gm14701-201ENSMUST00000117156 348 ntBASIC13.14□□□□□ -0.31
Col6a5A6H584 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.14□□□□□ -0.31
Col6a5A6H584 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col6a5A6H584 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a5A6H584 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col6a5A6H584 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms