Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.19□□□□□ -0.14
Chd6A3KFM7 Gm44872-201ENSMUST00000207864 420 ntBASIC14.19□□□□□ -0.14
Chd6A3KFM7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.19□□□□□ -0.14
Chd6A3KFM7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chd6A3KFM7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Mir3113-201ENSMUST00000175478 76 ntBASIC14.17□□□□□ -0.14
Chd6A3KFM7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Chd6A3KFM7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chd6A3KFM7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.16□□□□□ -0.14
Chd6A3KFM7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Mir6977-201ENSMUST00000184960 64 ntBASIC14.16□□□□□ -0.14
Chd6A3KFM7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.16□□□□□ -0.14
Chd6A3KFM7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chd6A3KFM7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.16□□□□□ -0.14
Chd6A3KFM7 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gm13401-201ENSMUST00000117074 291 ntBASIC14.15□□□□□ -0.14
Chd6A3KFM7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.15□□□□□ -0.14
Chd6A3KFM7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chd6A3KFM7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms