Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm13418-201ENSMUST00000119097 944 ntBASIC9.23□□□□□ -0.93
Ubr4A2AN08 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm4974-201ENSMUST00000209974 875 ntBASIC9.23□□□□□ -0.93
Ubr4A2AN08 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm3786-201ENSMUST00000202659 378 ntBASIC9.23□□□□□ -0.93
Ubr4A2AN08 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Gm27628-201ENSMUST00000184911 107 ntBASIC9.23□□□□□ -0.93
Ubr4A2AN08 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ubr4A2AN08 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm25990-201ENSMUST00000102440 86 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm11025-201ENSMUST00000140773 466 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm27437-201ENSMUST00000183429 107 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm37352-201ENSMUST00000193908 2181 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm13401-201ENSMUST00000117074 291 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.22□□□□□ -0.93
Ubr4A2AN08 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.22□□□□□ -0.93
Ubr4A2AN08 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 AC125350.1-201ENSMUST00000225115 903 ntBASIC9.21□□□□□ -0.93
Ubr4A2AN08 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Ubr4A2AN08 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.21□□□□□ -0.94
Ubr4A2AN08 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.21□□□□□ -0.94
Ubr4A2AN08 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Ubr4A2AN08 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.2□□□□□ -0.94
Ubr4A2AN08 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Ubr4A2AN08 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms