Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smim17A0A504 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.84■□□□□ 0.13
Smim17A0A504 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.84■□□□□ 0.13
Smim17A0A504 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim17A0A504 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim17A0A504 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smim17A0A504 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smim17A0A504 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Smim17A0A504 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.83■□□□□ 0.12
Smim17A0A504 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim17A0A504 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Smim17A0A504 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.82■□□□□ 0.12
Smim17A0A504 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.82■□□□□ 0.12
Smim17A0A504 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.82■□□□□ 0.12
Smim17A0A504 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.82■□□□□ 0.12
Smim17A0A504 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
Smim17A0A504 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.82■□□□□ 0.12
Smim17A0A504 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.82■□□□□ 0.12
Smim17A0A504 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim17A0A504 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.81■□□□□ 0.12
Smim17A0A504 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.81■□□□□ 0.12
Smim17A0A504 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smim17A0A504 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.81■□□□□ 0.12
Smim17A0A504 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.81■□□□□ 0.12
Smim17A0A504 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smim17A0A504 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim17A0A504 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Smim17A0A504 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.8■□□□□ 0.12
Smim17A0A504 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smim17A0A504 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smim17A0A504 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.8■□□□□ 0.12
Smim17A0A504 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms