Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Mir6349-201ENSMUST00000184059 97 ntBASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.51□□□□□ -0.09
Lnp1A0A1B0GSK3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm42545-201ENSMUST00000202755 922 ntBASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lnp1A0A1B0GSK3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Lnp1A0A1B0GSK3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Gm18025-201ENSMUST00000221733 862 ntBASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lnp1A0A1B0GSK3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Lnp1A0A1B0GSK3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms