Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Gm5408-201ENSMUST00000197998 747 ntBASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc194A0A140LIT1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gm12933-201ENSMUST00000120203 872 ntBASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc194A0A140LIT1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Gm11927-201ENSMUST00000118472 759 ntBASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc194A0A140LIT1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc194A0A140LIT1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc194A0A140LIT1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc194A0A140LIT1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms